How to stop the email notifications popping out to users when uploading the videos to the target ?

For the target connector account to stop getting the notifications when “Uploading Video”, you can follow the below steps:

In Stream Portal of the target connector account, click the Settings icon, and then under Stream, click My settings -> Email notifications, select Off and Apply.

Turn-off Notification

Reference Link : https://docs.microsoft.com/en-us/stream/notification-settings

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